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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120488179_120494655_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120488179 - 120494655

Intron Length:

6477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

EDVYARNRYKETPWCSPIKV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

77.3

30.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.1

0.45

65.3

41.1

Minor 5ss

29.2

-2.4

3.2

41.3

45.2

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

SRPX

Ensembl Gene ID:

ENSAPLG00000009886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010298

120475331 - 120516972

41642