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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120525604_120530838_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120525604 - 120530838

Intron Length:

5235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATACTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

SSNTTVETVEFSLFKRKPLT

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

31.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

83.3

0.75

0.8

39.4

Minor 5ss

39.9

-1.1

3.2

57.4

46.8

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

RPGR

Ensembl Gene ID:

ENSAPLG00000010057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010471

120525379 - 120588196

62818