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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120530630_120530838_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120530630 - 120530838

Intron Length:

209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATCT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTCTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TGTCTCTCTATA

Flanking Amino Acid:

SSNTTVETVETEETTQKETI

Intron Amino Acid Position:

652

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

31.3

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

78.8

0.65

0.8

73.3

31.8

Minor 5ss

39.9

-1.1

3.2

57.4

46.8

Minor BPS

47.8

-0.1

1.8

61.4

38.2

Associated Gene:

Gene:

RPGR

Ensembl Gene ID:

ENSAPLG00000010057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048254

120524860 - 120588196

63337

ENSAPLT00000025150

120525379 - 120587234

61856