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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120546302_120549179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120546302 - 120549179

Intron Length:

2878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATATAT

5'SS Class:

major

3'SS Sequence:

TCATTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

GTTATATTCATT

Flanking Amino Acid:

LGDTTDILNMTHVMKLNSGD

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

72.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

85.6

0.8

80.6

31.1

Minor 5ss

39.8

-1.1

3.1

53.3

44.9

Minor BPS

47.8

-0

70.19

40.9

Associated Gene:

Gene:

RPGR

Ensembl Gene ID:

ENSAPLG00000010057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048254

120524860 - 120588196

63337

ENSAPLT00000025150

120525379 - 120587234

61856

ENSAPLT00000010471

120525379 - 120588196

62818