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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120550673_120551627_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120550673 - 120551627

Intron Length:

955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAATTGA

5'SS Class:

major

3'SS Sequence:

TAATGTTCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

TSARMRRRERERSPEQMIRM

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

68.3

39.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

64.8

0.33

1.1

41.5

Minor 5ss

38.5

-1.3

2.9

40.8

45.4

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

RPGR

Ensembl Gene ID:

ENSAPLG00000010057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048254

120524860 - 120588196

63337

ENSAPLT00000025150

120525379 - 120587234

61856

ENSAPLT00000010471

120525379 - 120588196

62818