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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120551811_120553399_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120551811 - 120553399

Intron Length:

1589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAAACAT

5'SS Class:

major

3'SS Sequence:

TTTGCTGCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

ATAATCAGAACT

Flanking Amino Acid:

SNFLSFTVLLVACGGCHMLV

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

66.7

38.5

Major BPS

71.2

0.53

70.3

31.9

Major PPT

75.3

0.57

0.9

70.1

36.5

Minor 5ss

33.1

-1.9

3.3

44.6

44.3

Minor BPS

49.4

0.04

1.7

70.25

39.7

Associated Gene:

Gene:

RPGR

Ensembl Gene ID:

ENSAPLG00000010057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010471

120525379 - 120588196

62818

ENSAPLT00000048254

120524860 - 120588196

63337

ENSAPLT00000025150

120525379 - 120587234

61856