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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120566168_120574660_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120566168 - 120574660

Intron Length:

8493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGAAT

U12 Branch Point Sequence:

TCTTCTGTATTT

Flanking Amino Acid:

CGYYHSALITGDGELYTFGE

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

59.4

0.24

1.5

69.7

44.2

Major PPT

81.3

0.7

0.9

75.9

37.9

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

50.2

0.08

2.2

74.81

43.2

Associated Gene:

Gene:

RPGR

Ensembl Gene ID:

ENSAPLG00000010057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048254

120524860 - 120588196

63337

ENSAPLT00000025150

120525379 - 120587234

61856

ENSAPLT00000010471

120525379 - 120588196

62818