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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120574811_120576304_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120574811 - 120576304

Intron Length:

1494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTCATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

AATCTGTTAACA

Flanking Amino Acid:

AGSYTSAAVTEDGQLFVWGD

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

76.8

0.6

0.8

74.5

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

55.3

0.16

68.22

37.7

Associated Gene:

Gene:

RPGR

Ensembl Gene ID:

ENSAPLG00000010057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048254

120524860 - 120588196

63337

ENSAPLT00000025150

120525379 - 120587234

61856

ENSAPLT00000010471

120525379 - 120588196

62818