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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120576464_120578046_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120576464 - 120578046

Intron Length:

1583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTATATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TTTTCTATATGC

Flanking Amino Acid:

CGRNHTLVYTEKGNVYAAGG

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

83.1

28.6

Major BPS

73.9

0.59

30.2

Major PPT

82.6

0.73

0.9

78.2

34.2

Minor 5ss

42.1

-0.9

2.5

53.5

43.9

Minor BPS

49.6

-0

2.1

70.85

40.8

Associated Gene:

Gene:

RPGR

Ensembl Gene ID:

ENSAPLG00000010057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048254

120524860 - 120588196

63337

ENSAPLT00000025150

120525379 - 120587234

61856

ENSAPLT00000010471

120525379 - 120588196

62818