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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120578110_120580260_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120578110 - 120580260

Intron Length:

2151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTTA

5'SS Class:

major

3'SS Sequence:

CTTTAATTCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTGCCTTTAATT

Flanking Amino Acid:

NTVSKPTCVKALKPEKAKLA

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

77.9

32.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

74.8

0.56

0.8

69.2

35.6

Minor 5ss

46.2

-0.4

2.4

58.8

45.7

Minor BPS

76.3

0.9

1.1

85.09

35.7

Associated Gene:

Gene:

RPGR

Ensembl Gene ID:

ENSAPLG00000010057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025150

120525379 - 120587234

61856

ENSAPLT00000010471

120525379 - 120588196

62818

ENSAPLT00000048254

120524860 - 120588196

63337