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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120586951_120588108_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120586951 - 120588108

Intron Length:

1158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATGTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTCACTAAAAT

Flanking Amino Acid:

PAGEPELTVPESGAVFTFGK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.8

0.74

0.8

81.4

35.9

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

51.4

0.12

1.9

74.66

41.3

Associated Gene:

Gene:

RPGR

Ensembl Gene ID:

ENSAPLG00000010057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048254

120524860 - 120588196

63337

ENSAPLT00000010471

120525379 - 120588196

62818