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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120594828_120595420_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120594828 - 120595420

Intron Length:

593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTTTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

ATGCCTTCAACT

Flanking Amino Acid:

LKHRIKHKGEYLPLMQGKAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

71.9

32.2

Major BPS

65.3

0.38

71.6

30.1

Major PPT

79.8

0.67

0.8

72.5

37.7

Minor 5ss

38.6

-1.3

3.1

51.6

45.1

Minor BPS

62.4

0.47

1.5

76.26

40.2

Associated Gene:

Gene:

OTC

Ensembl Gene ID:

ENSAPLG00000010113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010559

120590833 - 120618406

27574