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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120723103_120725294_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120723103 - 120725294

Intron Length:

2192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

AATACTCTGACA

Flanking Amino Acid:

CRGSPWMLKLYAMFLSLVFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

68.8

41.8

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

86.1

0.81

0.7

83.7

24.4

Minor 5ss

32.7

-2

3.1

40.8

Minor BPS

50.9

0.02

1.7

63.24

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026339

120714379 - 120741290

26912

ENSAPLT00000010794

120660860 - 120741290

80431