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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120725370_120727725_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120725370 - 120727725

Intron Length:

2356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGTT

U12 Branch Point Sequence:

TTGTTTTTCCCC

Flanking Amino Acid:

GISGFVFRHEIKDTFLRTYT

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.4

39.5

Major BPS

38.1

-0.7

4.3

71.4

45.1

Major PPT

79.2

0.66

0.7

77.7

24.1

Minor 5ss

30.7

-2.2

3.4

40.4

45.8

Minor BPS

41.3

-0.6

3.5

64.7

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026339

120714379 - 120741290

26912

ENSAPLT00000010794

120660860 - 120741290

80431