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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120727822_120730111_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120727822 - 120730111

Intron Length:

2290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

TTTTTTCTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTATTAATT

Flanking Amino Acid:

SHAVDNVQESLSCCGIQSYT

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.4

63.6

48.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

92.2

0.95

0.5

89.3

19.6

Minor 5ss

38.8

-1.3

45.9

42.4

Minor BPS

69.9

0.7

1.6

84.39

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026339

120714379 - 120741290

26912

ENSAPLT00000010794

120660860 - 120741290

80431