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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120730268_120734468_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

120730268 - 120734468

Intron Length:

4201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTAGTA

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

AGATCTATACAA

Flanking Amino Acid:

TVAATKVNQKGCYDLVTSFM

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

68.2

Major BPS

84.7

0.86

74.3

40.7

Major PPT

85.4

0.8

0.9

76.9

42.1

Minor 5ss

-1.9

3.6

47.5

47.9

Minor BPS

44.6

-0.4

1.9

53.84

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010794

120660860 - 120741290

80431

ENSAPLT00000026339

120714379 - 120741290

26912