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Intron Name: Anas_platyrhynchos_platyrhynchos_1_120734553_120739920_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

120734553 - 120739920

Intron Length:

5368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CCGTCTGGAACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACCCAA

U12 Branch Point Sequence:

CCGTCTGGAACA

Flanking Amino Acid:

GVAFGIAFSQLIGMLLACCL

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

84.1

26.6

Major BPS

48.6

-0

1.1

56.4

30.9

Major PPT

0.18

1.1

53.2

40.4

Minor 5ss

-1.9

3.1

41.6

Minor BPS

-0.3

2.1

55.13

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026339

120714379 - 120741290

26912

ENSAPLT00000010794

120660860 - 120741290

80431