Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_12077043_12081148_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12077043 - 12081148

Intron Length:

4106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCATCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTGTTTTCATCT

Flanking Amino Acid:

RNGKIIYTWKGNQRETHIGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

78.6

35.9

Major BPS

100

1.24

0.5

100

Major PPT

83.1

0.74

0.7

78.6

28.9

Minor 5ss

38.1

-1.3

3.1

52.9

44.3

Minor BPS

54.3

0.21

1.8

75.24

42.1

Associated Gene:

Gene:

GSAP

Ensembl Gene ID:

ENSAPLG00000012156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033268

12073688 - 12119086

45399

ENSAPLT00000032612

12073688 - 12119086

45399

ENSAPLT00000012725

12073688 - 12119086

45399