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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12112380_12112835_F


Intron Information:

Intron Rank:
25

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
12112380 - 12112835

Intron Length:
456

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTT|GTGAGCAAG

5'SS Class:
major

3'SS Sequence:
TTTTATTAAATAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTTATTAAAT

Flanking Amino Acid:
RYRLHSCIFCFDERGSAAEF

Intron Amino Acid Position:
655

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.5
0.37
1.1
59.6
40.7

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
73.2
0.52
1
71
38.6

Minor 5ss
35.9
-1.6
3
45.6
43.8

Minor BPS
71.5
0.75
1.6
90.38
32.6

Associated Gene:

Gene:
GSAP

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12073688 - 12119086
45399

12073688 - 12119086
45399

12073688 - 12119086
45399

12073688 - 12119086
45399