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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12120985_12122226_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12120985 - 12122226

Intron Length:

1242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

ACCATGTGAACA

Flanking Amino Acid:

YKEAAEARARQAAEEEQAAV

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.6

33.2

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

93.7

0.98

0.6

88.2

29.1

Minor 5ss

47.4

-0.3

2.8

63.8

41.6

Minor BPS

43.5

-0.5

2.1

50.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012643

12120781 - 12134577

13797