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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121265268_121267227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121265268 - 121267227

Intron Length:

1960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATACAAC

U12 Branch Point Sequence:

TATTTTGTAACA

Flanking Amino Acid:

ALSMGFSVEEDLSWPGLAVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

76.7

34.9

Major BPS

48.6

-0

1.2

56.8

35.9

Major PPT

77.5

0.62

73.6

40.4

Minor 5ss

45.6

-0.5

2.5

57.3

47.4

Minor BPS

61.4

0.35

75.62

35.9

Associated Gene:

Gene:

ATP6AP2

Ensembl Gene ID:

ENSAPLG00000015929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037581

121264020 - 121272296

8277

ENSAPLT00000019569

121264115 - 121272641

8527

ENSAPLT00000016629

121262991 - 121273119

10129