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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121290838_121291047_R


Intron Information:

Intron Rank:
26

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
121290838 - 121291047

Intron Length:
210

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTACGTACT

5'SS Class:
major

3'SS Sequence:
TGTCTTTCTTTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TACTAAT

U12 Branch Point Sequence:
GTTATCTAAATA

Flanking Amino Acid:
QVLEKFFETRVAGPPFKANT

Intron Amino Acid Position:
1217

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.5
0.44
1.1
69.3
41.5

Major BPS
86.7
0.91
0.7
84.2
21.8

Major PPT
82.7
0.73
0.7
81.5
30.5

Minor 5ss
38.6
-1.3
3
48.7
41.1

Minor BPS
57.6
0.24
1.7
68.23
38.5

Associated Gene:

Gene:
MED14

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

121285551 - 121322515
36965

121285696 - 121322515
36820

121285696 - 121320364
34669