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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121304954_121305925_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
121304954 - 121305925

Intron Length:
972

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTATGTGTT

5'SS Class:
major

3'SS Sequence:
TTTTGTTGTTTAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATTAAC

U12 Branch Point Sequence:
AAATTATTAACA

Flanking Amino Acid:
ILKSYNVNDNSFIETALPTL

Intron Amino Acid Position:
352

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.1
0.45
1.1
71.2
38.6

Major BPS
81.9
0.79
0.8
81.9
25

Major PPT
81.3
0.7
0.9
81.2
36.5

Minor 5ss
47.6
-0.2
3.2
76.1
39.5

Minor BPS
63
0.4
1.5
69.22
36.1

Associated Gene:

Gene:
MED14

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

121285551 - 121322515
36965

121285696 - 121322515
36820

121285696 - 121320364
34669