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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121312403_121313153_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
121312403 - 121313153

Intron Length:
751

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTAAATAAC

5'SS Class:
major

3'SS Sequence:
TTTATTTTAACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
TTTATTTTAACA

Flanking Amino Acid:
SYPRLPTCIRDKIIPPDPIT

Intron Amino Acid Position:
98

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.3
0.67
1
74.7
35.6

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
84.3
0.77
0.9
81.1
35.2

Minor 5ss
34.9
-1.7
2.8
36.9
40.6

Minor BPS
77.6
0.86
1.1
83.48
30.3

Associated Gene:

Gene:
MED14

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

121285551 - 121322515
36965

121285696 - 121322515
36820

121285696 - 121320364
34669