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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12132310_12134207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12132310 - 12134207

Intron Length:

1898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCGTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

GTTGCGTTAAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

73.1

0.58

79.6

29.1

Major PPT

64.7

0.33

1.2

63.3

42.2

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

49.2

-0.2

2.3

61.3

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012643

12120781 - 12134577

13797