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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121402198_121407087_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121402198 - 121407087

Intron Length:

4890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTAAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTTTTAAAA

Flanking Amino Acid:

LEAAIDLSKKGLDVKSEACQ

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

69.9

0.45

67.6

36.9

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

69.4

0.6

1.3

77.65

32.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014792

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043956

121399535 - 121470659

71125

ENSAPLT00000040276

121399535 - 121470659

71125

ENSAPLT00000015528

121399535 - 121470525

70991