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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121408194_121409251_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121408194 - 121409251

Intron Length:

1058

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCAGCT

5'SS Class:

major

3'SS Sequence:

TATTATATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

ATTATTATATTT

Flanking Amino Acid:

ARPPDPRSPKGWLVDLINKF

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.2

65.2

39.1

Major BPS

84.7

0.86

74.3

40.7

Major PPT

81.8

0.71

0.9

78.6

39.1

Minor 5ss

44.7

-0.6

3.2

45.1

Minor BPS

46.9

-0.1

1.8

67.29

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014792

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015528

121399535 - 121470525

70991

ENSAPLT00000043956

121399535 - 121470659

71125

ENSAPLT00000040276

121399535 - 121470659

71125