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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12142157_12143663_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12142157 - 12143663

Intron Length:

1507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATGTTTT

5'SS Class:

weak_major

3'SS Sequence:

AATATATCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTTTGTTAAAAT

Flanking Amino Acid:

KETEKIKWKKIDAEKKKQTL

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

82.6

30.5

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

66.9

0.38

58.9

41.1

Minor 5ss

66.3

0.55

2.2

79.9

33.6

Minor BPS

54.2

0.21

2.2

80.63

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037909

12140018 - 12157693

17676