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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121431532_121433490_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

121431532 - 121433490

Intron Length:

1959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATA

5'SS Class:

strong_major

3'SS Sequence:

TTAATGTAAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

NLGPRLQVNQVVIHEDFIQS

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.2

28.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

59.7

0.22

1.1

55.6

43.5

Minor 5ss

36.4

-1.5

3.1

48.8

46.9

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014792

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043956

121399535 - 121470659

71125

ENSAPLT00000040276

121399535 - 121470659

71125

ENSAPLT00000015528

121399535 - 121470525

70991