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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121435614_121435810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121435614 - 121435810

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GTAATCTTAATA

Flanking Amino Acid:

IGQLNLKDKTLITAKLTQIN

Intron Amino Acid Position:

960

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

85.6

31.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

85.6

0.8

80.6

Minor 5ss

39.1

-1.2

3.4

45.5

Minor BPS

67.1

0.53

1.3

69.57

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014792

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015528

121399535 - 121470525

70991

ENSAPLT00000043956

121399535 - 121470659

71125

ENSAPLT00000040276

121399535 - 121470659

71125