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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12144487_12144956_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

12144487 - 12144956

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

GGAAGCAGATAAG|A

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTCTACTTAATT

Flanking Amino Acid:

KEYERIPKQSRIKKLKENCD

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

74.7

41.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

42.6

-0.4

1.1

32.2

Minor 5ss

41.3

-1

2.8

52.3

44.3

Minor BPS

77.2

0.93

1.4

88.84

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037909

12140018 - 12157693

17676