Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_121482020_121482680_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121482020 - 121482680

Intron Length:

661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

CGGTGTATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACCAT

U12 Branch Point Sequence:

CGTGTGTTACCA

Flanking Amino Acid:

VISSANRAVVGIVAGGGRID

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.5

41.9

Major BPS

65.6

0.39

1.3

75.1

39.4

Major PPT

68.8

0.42

58.4

46.2

Minor 5ss

41.2

-1

2.9

54.6

44.5

Minor BPS

43.5

-0.5

2.3

54.59

44.6

Associated Gene:

Gene:

RPL8

Ensembl Gene ID:

ENSAPLG00000014582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015252

121481470 - 121485303

3834