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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121483417_121485159_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
121483417 - 121485159

Intron Length:
1743

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACGGCCG

5'SS Class:
major

3'SS Sequence:
TGTGTTCCAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
TTCAACTTACCC

Flanking Amino Acid:
RHGYIKGIVKDIIHDPGRGA

Intron Amino Acid Position:
47

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.9
0.63
1.1
58.1
46.4

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
71.9
0.49
1
66.7
39.5

Minor 5ss
30
-2.3
3.4
39.4
46

Minor BPS
54.6
0.12
1.9
68.11
43.3

Associated Gene:

Gene:
RPL8

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

121481470 - 121485303
3834