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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121522354_121522960_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121522354 - 121522960

Intron Length:

607

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CAGTTTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

GGGGTACTAATT

Flanking Amino Acid:

GPGDALRAMKENGRYGRRKQ

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

100

1.18

0.7

100

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

0.59

72.9

41.9

Minor 5ss

31.3

-2.1

50.6

45.9

Minor BPS

42.6

-0.4

1.9

54.84

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014911

121510751 - 121526222

15472

ENSAPLT00000044453

121513006 - 121526890

13885

ENSAPLT00000019981

121510665 - 121526222

15558