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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121549456_121549595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

121549456 - 121549595

Intron Length:

140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

GTTCCCACCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

AGTCCCTGACCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.4

32.7

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

70.8

0.47

0.9

Minor 5ss

-2.1

3.1

39.6

46.4

Minor BPS

52.9

0.09

1.8

65.52

40.1

Associated Gene:

Gene:

NYX

Ensembl Gene ID:

ENSAPLG00000002105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002101

121548089 - 121554812

6724