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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121580713_121583667_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121580713 - 121583667

Intron Length:

2955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTTATATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTGCATTAAAA

Flanking Amino Acid:

HPDRFAYPIPHTTRPPKKDE

Intron Amino Acid Position:

773

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.3

68.8

42.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.9

0.85

0.8

85.5

33.8

Minor 5ss

37.6

-1.4

2.7

46.5

Minor BPS

64.1

0.44

1.8

78.09

38.1

Associated Gene:

Gene:

CASK

Ensembl Gene ID:

ENSAPLG00000013996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014603

121571030 - 121781229

210200

ENSAPLT00000040728

121570758 - 121781229

210472

ENSAPLT00000024607

121570758 - 121781229

210472

ENSAPLT00000020708

121570758 - 121781229

210472

ENSAPLT00000019277

121570758 - 121781229

210472

ENSAPLT00000043412

121570758 - 121781229

210472