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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121593117_121600411_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121593117 - 121600411

Intron Length:

7295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTATTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TTGGCTTTATTC

Flanking Amino Acid:

SYRTQSSSCEDLPSTTQPKG

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

77.6

33.1

Major BPS

58.9

0.22

49.8

35.1

Major PPT

86.2

0.81

0.7

80.9

30.7

Minor 5ss

38.5

-1.3

3.4

55.5

48.6

Minor BPS

55.8

0.16

1.7

65.28

41.5

Associated Gene:

Gene:

CASK

Ensembl Gene ID:

ENSAPLG00000013996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024607

121570758 - 121781229

210472