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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121600481_121602026_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121600481 - 121602026

Intron Length:

1546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

TCTCTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

GCATCTTTAATG

Flanking Amino Acid:

QTVEQLQKMLREMRGSITFK

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

1.1

69.3

36.6

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

91.5

0.93

0.6

86.8

Minor 5ss

36.5

-1.5

3.2

39.8

Minor BPS

65.8

0.36

1.3

60.56

41.8

Associated Gene:

Gene:

CASK

Ensembl Gene ID:

ENSAPLG00000013996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020708

121570758 - 121781229

210472

ENSAPLT00000019277

121570758 - 121781229

210472

ENSAPLT00000043412

121570758 - 121781229

210472

ENSAPLT00000014603

121571030 - 121781229

210200

ENSAPLT00000040728

121570758 - 121781229

210472

ENSAPLT00000024607

121570758 - 121781229

210472