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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121605695_121610740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121605695 - 121610740

Intron Length:

5046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TAATCTCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

GTTGCTGTAATC

Flanking Amino Acid:

KRILTQPHFMALLQTHDVVA

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

0.49

0.9

63.5

38.8

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

51.2

0.02

2.1

66.24

40.3

Associated Gene:

Gene:

CASK

Ensembl Gene ID:

ENSAPLG00000013996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014603

121571030 - 121781229

210200

ENSAPLT00000040728

121570758 - 121781229

210472

ENSAPLT00000024607

121570758 - 121781229

210472

ENSAPLT00000020708

121570758 - 121781229

210472

ENSAPLT00000019277

121570758 - 121781229

210472

ENSAPLT00000043412

121570758 - 121781229

210472