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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121610822_121612239_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121610822 - 121612239

Intron Length:

1418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGGCT

5'SS Class:

major

3'SS Sequence:

GTTTGTTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

GTATCTTTACTG

Flanking Amino Acid:

PSDAVQRAKEVLEEISCYPE

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

72.4

37.1

Major BPS

0.6

65.6

41.1

Major PPT

77.9

0.63

72.2

42.7

Minor 5ss

31.9

-2.1

3.6

48.1

47.5

Minor BPS

57.3

0.09

1.7

60.56

41.8

Associated Gene:

Gene:

CASK

Ensembl Gene ID:

ENSAPLG00000013996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024607

121570758 - 121781229

210472

ENSAPLT00000020708

121570758 - 121781229

210472

ENSAPLT00000019277

121570758 - 121781229

210472

ENSAPLT00000043412

121570758 - 121781229

210472

ENSAPLT00000014603

121571030 - 121781229

210200

ENSAPLT00000040728

121570758 - 121781229

210472