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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121612318_121628568_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121612318 - 121628568

Intron Length:

16251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

TTCTTGTTATTT

Flanking Amino Acid:

QDQHLHTLLDLYDKINTKSS

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

89.9

23.2

Major BPS

0.79

0.8

83.7

25.7

Major PPT

0.77

0.8

81.4

34.9

Minor 5ss

48.6

-0.1

2.8

71.8

38.1

Minor BPS

49.9

0.07

2.3

74.56

43.3

Associated Gene:

Gene:

CASK

Ensembl Gene ID:

ENSAPLG00000013996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020708

121570758 - 121781229

210472

ENSAPLT00000019277

121570758 - 121781229

210472

ENSAPLT00000043412

121570758 - 121781229

210472

ENSAPLT00000014603

121571030 - 121781229

210200

ENSAPLT00000040728

121570758 - 121781229

210472

ENSAPLT00000024607

121570758 - 121781229

210472