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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121628691_121641865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

121628691 - 121641865

Intron Length:

13175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTAG

5'SS Class:

major

3'SS Sequence:

TATTGCCCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCCTATTTATTG

Flanking Amino Acid:

PDFSEDPTSSGAVSQVLDSL

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

69.5

37.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.1

0.43

0.8

62.5

34.4

Minor 5ss

45.7

-0.5

2.5

57.9

46.8

Minor BPS

47.6

-0.3

1.8

51.23

44.1

Associated Gene:

Gene:

CASK

Ensembl Gene ID:

ENSAPLG00000013996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040728

121570758 - 121781229

210472

ENSAPLT00000024607

121570758 - 121781229

210472

ENSAPLT00000020708

121570758 - 121781229

210472

ENSAPLT00000019277

121570758 - 121781229

210472

ENSAPLT00000043412

121570758 - 121781229

210472