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Intron Name: Anas_platyrhynchos_platyrhynchos_1_121953104_122007862_R

Intron Information:

Intron Rank:

152136

Intron Class:

major

Intron Phase:

Intron Coordinates:

121953104 - 122007862

Intron Length:

54759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTTTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GTTTAATGAGCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

81.8

0.79

1.1

34.5

Major PPT

76.2

0.59

74.7

33.9

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

46.1

-0.3

2.1

64.11

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029438

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021552

121952713 - 122013958

61246