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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122072879_122072954_F

Intron Information:

Intron Rank:

146300

Intron Class:

major

Intron Phase:

Intron Coordinates:

122072879 - 122072954

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCATCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

GCTTTGTCATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

80.2

0.68

0.9

74.3

35.4

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

43.8

-0.3

2.4

64.13

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033831

122072640 - 122077197

4558