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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122074956_122077089_F

Intron Information:

Intron Rank:

146303

Intron Class:

major

Intron Phase:

Intron Coordinates:

122074956 - 122077089

Intron Length:

2134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TTCTCCTTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

82.1

30.4

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

86.1

0.81

0.7

25.5

Minor 5ss

36.9

-1.5

2.9

47.6

42.5

Minor BPS

62.1

0.24

1.8

68.4

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033831

122072640 - 122077197

4558