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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122154903_122159932_F

Intron Information:

Intron Rank:

124997

Intron Class:

major

Intron Phase:

Intron Coordinates:

122154903 - 122159932

Intron Length:

5030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

TCTTCCCTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

69.5

0.48

73.5

28.6

Major PPT

82.6

0.73

0.7

76.4

25.9

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

48.7

-0.2

2.1

61.25

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028683

122154698 - 122178459

23762

ENSAPLT00000018297

122154698 - 122176770

22073