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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122160035_122176058_F

Intron Information:

Intron Rank:

124998

Intron Class:

major

Intron Phase:

Intron Coordinates:

122160035 - 122176058

Intron Length:

16024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

GTTTATATATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

ATTTTCGTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

76.2

39.9

Major BPS

79.2

0.73

75.3

39.4

Major PPT

73.6

0.53

71.8

42.4

Minor 5ss

43.5

-0.7

2.9

52.9

44.1

Minor BPS

51.5

0.12

2.2

77.4

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028683

122154698 - 122178459

23762

ENSAPLT00000018297

122154698 - 122176770

22073