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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122176219_122178243_F

Intron Information:

Intron Rank:

125005

Intron Class:

major

Intron Phase:

Intron Coordinates:

122176219 - 122178243

Intron Length:

2025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTCCA

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTCTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

61.7

38.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

31.3

-2.1

2.8

39.3

39.7

Minor BPS

77.1

0.85

1.5

87.01

30.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028683

122154698 - 122178459

23762