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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122236095_122239697_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
122236095 - 122239697

Intron Length:
3603

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTACGTAAC

5'SS Class:
major

3'SS Sequence:
GTGTTTCATGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTCAT

U12 Branch Point Sequence:
TGTTCAGTACCT

Flanking Amino Acid:
KELINKTCWTKAGKEFATLF

Intron Amino Acid Position:
210

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.5
0.65
1
75.3
34.7

Major BPS
82.2
0.8
1.1
85.7
34.9

Major PPT
75.7
0.58
1
70.3
40.4

Minor 5ss
36.7
-1.5
3
45.2
36.9

Minor BPS
48.4
-0
2.5
77.89
44.1

Associated Gene:

Gene:
MAOA

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

122211120 - 122250844
39725

122211120 - 122250943
39824