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Intron Name: Anas_platyrhynchos_platyrhynchos_1_122248790_122250252_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
122248790 - 122250252

Intron Length:
1463

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACAGACC

5'SS Class:
major

3'SS Sequence:
ATTTTAATTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
ACAATTTTAATT

Flanking Amino Acid:
VQAGERAAREILHRMGKISE

Intron Amino Acid Position:
501

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.2
0.5
1.1
64
40.4

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
76.7
0.6
0.9
68.3
41.8

Minor 5ss
31.8
-2.1
3.4
43.8
43.7

Minor BPS
59.6
0.38
1.2
67.04
38.3

Associated Gene:

Gene:
MAOA

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

122211120 - 122250844
39725

122211120 - 122250943
39824